Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
NACAE9PAV3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
NACAE9PAV3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 MIR661-201ENST00000384842 89 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.42□□□□□ -0.58
NACAE9PAV3 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.42□□□□□ -0.58
NACAE9PAV3 COX20P2-201ENST00000452636 358 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.42□□□□□ -0.58
NACAE9PAV3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.42□□□□□ -0.58
NACAE9PAV3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.42□□□□□ -0.58
NACAE9PAV3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.42□□□□□ -0.58
NACAE9PAV3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 AC025678.2-201ENST00000562061 970 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.42□□□□□ -0.58
NACAE9PAV3 MIR3197-201ENST00000582241 73 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.42□□□□□ -0.58
NACAE9PAV3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.42□□□□□ -0.58
NACAE9PAV3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
NACAE9PAV3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
NACAE9PAV3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.41□□□□□ -0.58
NACAE9PAV3 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.41□□□□□ -0.58
NACAE9PAV3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 RBPMS2P1-201ENST00000437762 623 ntBASIC11.41□□□□□ -0.58
NACAE9PAV3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.41□□□□□ -0.58
NACAE9PAV3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.41□□□□□ -0.58
NACAE9PAV3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 AC069120.2-201ENST00000524091 540 ntBASIC11.41□□□□□ -0.58
NACAE9PAV3 SLC25A39P2-201ENST00000537614 270 ntBASIC11.41□□□□□ -0.58
NACAE9PAV3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.41□□□□□ -0.58
NACAE9PAV3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 AC006486.2-201ENST00000624246 2199 ntBASIC11.41□□□□□ -0.58
NACAE9PAV3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
NACAE9PAV3 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NACAE9PAV3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.41□□□□□ -0.58
NACAE9PAV3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NACAE9PAV3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC091951.1-201ENST00000512854 2465 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms