Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYRM9A8MSI8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYRM9A8MSI8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LYRM9A8MSI8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LYRM9A8MSI8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
LYRM9A8MSI8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LYRM9A8MSI8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.03□□□□□ -0.64
LYRM9A8MSI8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 KRT8P22-201ENST00000562317 1415 ntBASIC11.03□□□□□ -0.64
LYRM9A8MSI8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 GHSR-202ENST00000427970 912 ntBASIC11.03□□□□□ -0.64
LYRM9A8MSI8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 GAPDHP40-201ENST00000505218 1006 ntBASIC11.03□□□□□ -0.64
LYRM9A8MSI8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.03□□□□□ -0.64
LYRM9A8MSI8 AC008741.2-201ENST00000612792 3115 ntBASIC11.03□□□□□ -0.64
LYRM9A8MSI8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 PAUPAR-201ENST00000630360 2965 ntBASIC11.03□□□□□ -0.64
LYRM9A8MSI8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LYRM9A8MSI8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 AL138799.1-201ENST00000448213 1675 ntBASIC11.02□□□□□ -0.64
LYRM9A8MSI8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
LYRM9A8MSI8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.02□□□□□ -0.65
LYRM9A8MSI8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 COX20P2-201ENST00000452636 358 ntBASIC11.02□□□□□ -0.65
LYRM9A8MSI8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.02□□□□□ -0.65
LYRM9A8MSI8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms