Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA5Q9Y5G8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA5Q9Y5G8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AC148477.4-201ENST00000613430 1793 ntBASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 KRT8P29-201ENST00000420409 1371 ntBASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AL354877.1-201ENST00000424412 413 ntBASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AL596276.2-201ENST00000447525 331 ntBASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AC106794.1-201ENST00000506935 792 ntBASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 RN7SL574P-201ENST00000581512 297 ntBASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 AC006480.2-201ENST00000609770 1337 ntBASIC15.17■□□□□ 0.02
PCDHGA5Q9Y5G8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA5Q9Y5G8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms