Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 POM121L8P-201ENST00000417732 1281 ntBASIC16.03■□□□□ 0.16
YIPF1Q9Y548 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 FAM8A4P-201ENST00000435433 1213 ntBASIC16.03■□□□□ 0.16
YIPF1Q9Y548 POM121L9P-203ENST00000441984 1285 ntBASIC16.03■□□□□ 0.16
YIPF1Q9Y548 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 AC104306.2-201ENST00000451877 341 ntBASIC16.03■□□□□ 0.16
YIPF1Q9Y548 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 MIR3615-201ENST00000581999 87 ntBASIC16.03■□□□□ 0.16
YIPF1Q9Y548 AC103810.3-201ENST00000583567 96 ntBASIC16.03■□□□□ 0.16
YIPF1Q9Y548 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.02■□□□□ 0.16
YIPF1Q9Y548 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 AC099398.1-201ENST00000567919 2776 ntBASIC16.02■□□□□ 0.16
YIPF1Q9Y548 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 AL022328.3-201ENST00000607943 679 ntBASIC16.02■□□□□ 0.16
YIPF1Q9Y548 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YIPF1Q9Y548 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 AC055811.4-201ENST00000624039 1754 ntBASIC16.02■□□□□ 0.15
YIPF1Q9Y548 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 PCDHA1-201ENST00000378133 2726 ntBASIC16.02■□□□□ 0.15
YIPF1Q9Y548 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
YIPF1Q9Y548 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
YIPF1Q9Y548 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
YIPF1Q9Y548 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms