Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NINLQ9Y2I6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 MTX1P1-201ENST00000440904 838 ntBASIC20.92■□□□□ 0.94
NINLQ9Y2I6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 MIR4722-201ENST00000578292 60 ntBASIC20.92■□□□□ 0.94
NINLQ9Y2I6 RN7SL713P-201ENST00000582127 302 ntBASIC20.92■□□□□ 0.94
NINLQ9Y2I6 AL118558.3-201ENST00000607414 1079 ntBASIC20.92■□□□□ 0.94
NINLQ9Y2I6 U62317.3-201ENST00000608319 855 ntBASIC20.92■□□□□ 0.94
NINLQ9Y2I6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.92■□□□□ 0.94
NINLQ9Y2I6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NINLQ9Y2I6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC008894.3-201ENST00000624324 3103 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 BTBD6P1-201ENST00000412176 1267 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC079178.1-201ENST00000420915 656 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 CALR4P-201ENST00000431943 946 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 FAM8A4P-201ENST00000435433 1213 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 MESTP3-201ENST00000503460 968 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC073413.1-201ENST00000603927 732 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 ZACNP1-201ENST00000612259 710 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC005695.3-201ENST00000614522 232 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AC138466.3-201ENST00000619983 221 ntBASIC20.91■□□□□ 0.94
NINLQ9Y2I6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms