Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 CASP16P-204ENST00000635032 809 ntBASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 AL627231.1-201ENST00000394467 1125 ntBASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 RN7SL258P-201ENST00000478664 300 ntBASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 RCC2P8-201ENST00000502779 1035 ntBASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 POU5F1P2-201ENST00000521750 823 ntBASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 SNORD3B-2-202ENST00000571722 791 ntBASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H4Q9UPT8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC073150.1-201ENST00000450406 1084 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC079112.1-201ENST00000454972 939 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC010234.1-201ENST00000494599 870 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AL022344.2-201ENST00000568976 968 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC138894.2-201ENST00000602838 371 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 MIR6842-201ENST00000612539 65 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms