Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 DUX4L27-201ENST00000554796 1261 ntBASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 AC003101.2-201ENST00000612557 442 ntBASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 AC007967.4-201ENST00000614700 386 ntBASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CNOT11Q9UKZ1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AC107890.1-201ENST00000422478 521 ntBASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AC140878.1-201ENST00000565277 250 ntBASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AC061975.2-201ENST00000581722 295 ntBASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AC024267.1-201ENST00000582320 895 ntBASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AL365330.1-201ENST00000607459 531 ntBASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CNOT11Q9UKZ1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CNOT11Q9UKZ1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms