Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.03■□□□□ -0
CUEDC1Q9NWM3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 AC112693.3-201ENST00000624819 1983 ntBASIC15.02■□□□□ -0
CUEDC1Q9NWM3 C18orf15-201ENST00000623680 2534 ntBASIC15.02■□□□□ -0
CUEDC1Q9NWM3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 AL353779.1-201ENST00000434793 351 ntBASIC15.02■□□□□ -0
CUEDC1Q9NWM3 GIMAP3P-201ENST00000495150 836 ntBASIC15.02■□□□□ -0
CUEDC1Q9NWM3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 RARRES2P5-201ENST00000564013 466 ntBASIC15.02■□□□□ -0
CUEDC1Q9NWM3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 MIR6805-201ENST00000615055 62 ntBASIC15.02■□□□□ -0
CUEDC1Q9NWM3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 AL162274.1-201ENST00000617191 1098 ntBASIC15.02■□□□□ -0
CUEDC1Q9NWM3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CUEDC1Q9NWM3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CUEDC1Q9NWM3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 AC007541.1-201ENST00000570282 1469 ntBASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 SLC7A15P-201ENST00000424028 1363 ntBASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 AC093004.1-201ENST00000508850 424 ntBASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 HILS1-202ENST00000545329 423 ntBASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 AC084346.2-201ENST00000607097 949 ntBASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms