Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC027601.5-201ENST00000624065 2482 ntBASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 BEND3P1-201ENST00000421591 1944 ntBASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 ACE3P-201ENST00000423435 1973 ntBASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 C8orf49-201ENST00000525043 1968 ntBASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.81□□□□□ -0.04
CCM2LQ9NUG4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 MYO15B-237ENST00000642007 4893 ntBASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 DUX4L27-201ENST00000554796 1261 ntBASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AL390955.2-201ENST00000603032 514 ntBASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AL009183.1-201ENST00000603760 355 ntBASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 AC068137.2-201ENST00000605408 478 ntBASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCM2LQ9NUG4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms