Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CISHQ9NSE2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CISHQ9NSE2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CISHQ9NSE2 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.47■□□□□ 0.23
CISHQ9NSE2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
CISHQ9NSE2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CISHQ9NSE2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CISHQ9NSE2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 AC133539.2-201ENST00000604757 467 ntBASIC16.46■□□□□ 0.23
CISHQ9NSE2 WFDC1-204ENST00000613603 549 ntBASIC16.46■□□□□ 0.23
CISHQ9NSE2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.46■□□□□ 0.23
CISHQ9NSE2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CISHQ9NSE2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CISHQ9NSE2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 REXO1L4P-201ENST00000605109 1937 ntBASIC16.45■□□□□ 0.22
CISHQ9NSE2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 AC004066.1-201ENST00000502488 802 ntBASIC16.45■□□□□ 0.22
CISHQ9NSE2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 AC007787.1-201ENST00000588095 1583 ntBASIC16.45■□□□□ 0.22
CISHQ9NSE2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 AL359258.3-201ENST00000622910 2331 ntBASIC16.45■□□□□ 0.22
CISHQ9NSE2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 KRT8P22-201ENST00000562317 1415 ntBASIC16.45■□□□□ 0.22
CISHQ9NSE2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.45■□□□□ 0.22
CISHQ9NSE2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CISHQ9NSE2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms