Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 IGHV3-62-201ENST00000520057 340 ntBASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 AL513190.1-201ENST00000621254 727 ntBASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CTNNBIP1Q9NSA3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 AC140479.7-201ENST00000636301 2332 ntBASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 KRT8P23-201ENST00000560090 1207 ntBASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 AP000842.3-202ENST00000569238 1080 ntBASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 AC011467.4-201ENST00000594891 528 ntBASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 ACE3P-201ENST00000423435 1973 ntBASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 CICP11-201ENST00000434745 2827 ntBASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTNNBIP1Q9NSA3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms