Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC105020.6-201ENST00000621523 1217 ntBASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 FN1-206ENST00000359671 8524 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AL021155.1-201ENST00000438808 2637 ntBASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42SE1Q9NRR8 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 LINC01144-201ENST00000626198 1710 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 INE2-201ENST00000630399 1874 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 TCAM1P-207ENST00000485295 1537 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 KRT8P41-201ENST00000533985 1514 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 RARRES2P2-201ENST00000394842 485 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SLC7A5P2-201ENST00000553010 536 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms