Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC027307.2-201ENST00000591252 911 ntBASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 AL450472.2-201ENST00000603663 1156 ntBASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 AC140113.2-201ENST00000604370 208 ntBASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCDHB16Q9NRJ7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 AL356585.2-201ENST00000625078 2396 ntBASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 TFAMP1-201ENST00000412727 736 ntBASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 AC007967.2-201ENST00000432613 625 ntBASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 AC040169.1-201ENST00000565382 521 ntBASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 COL6A4P2-202ENST00000504443 2753 ntBASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 BNIP3P1-202ENST00000550043 1585 ntBASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PCDHB16Q9NRJ7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.56□□□□□ -0.24
PCDHB16Q9NRJ7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms