Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH9Q9HC56 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PCDH9Q9HC56 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PCDH9Q9HC56 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 LINC00552-201ENST00000625151 2579 ntBASIC16.01■□□□□ 0.15
PCDH9Q9HC56 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.01■□□□□ 0.15
PCDH9Q9HC56 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 BASP1P1-201ENST00000430708 665 ntBASIC16.01■□□□□ 0.15
PCDH9Q9HC56 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 AL844908.2-201ENST00000609461 460 ntBASIC16.01■□□□□ 0.15
PCDH9Q9HC56 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH9Q9HC56 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDH9Q9HC56 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16■□□□□ 0.15
PCDH9Q9HC56 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH9Q9HC56 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16■□□□□ 0.15
PCDH9Q9HC56 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16■□□□□ 0.15
PCDH9Q9HC56 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 SLED1-202ENST00000512051 380 ntBASIC16■□□□□ 0.15
PCDH9Q9HC56 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16■□□□□ 0.15
PCDH9Q9HC56 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16■□□□□ 0.15
PCDH9Q9HC56 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 AC025048.3-201ENST00000590609 569 ntBASIC16■□□□□ 0.15
PCDH9Q9HC56 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16■□□□□ 0.15
PCDH9Q9HC56 AC005702.4-201ENST00000618393 416 ntBASIC16■□□□□ 0.15
PCDH9Q9HC56 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PCDH9Q9HC56 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH9Q9HC56 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms