Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC236430.1-201ENST00000402231 743 ntBASIC13.6□□□□□ -0.23
CDH20Q9HBT6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 TERF1P3-201ENST00000505638 1227 ntBASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC008761.3-201ENST00000624803 892 ntBASIC13.6□□□□□ -0.23
CDH20Q9HBT6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 AC126177.1-201ENST00000547829 2218 ntBASIC13.6□□□□□ -0.23
CDH20Q9HBT6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH20Q9HBT6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 TOMM22P5-201ENST00000416399 439 ntBASIC13.59□□□□□ -0.23
CDH20Q9HBT6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.59□□□□□ -0.23
CDH20Q9HBT6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 AC093004.1-201ENST00000508850 424 ntBASIC13.59□□□□□ -0.23
CDH20Q9HBT6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 AC036164.1-201ENST00000570544 333 ntBASIC13.59□□□□□ -0.23
CDH20Q9HBT6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.59□□□□□ -0.23
CDH20Q9HBT6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDH20Q9HBT6 DBET-201ENST00000630918 3363 ntBASIC13.58□□□□□ -0.23
CDH20Q9HBT6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.58□□□□□ -0.23
CDH20Q9HBT6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms