Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 AL353779.1-201ENST00000434793 351 ntBASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 FAM207CP-201ENST00000443486 507 ntBASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 SERBP1P5-201ENST00000510079 1181 ntBASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 MIR8072-201ENST00000614241 80 ntBASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCSER1Q9C0I3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCSER1Q9C0I3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 AL360270.3-201ENST00000609118 1348 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 CICP23-201ENST00000605013 2741 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 VDAC1P7-201ENST00000462417 847 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 RPL13AP25-201ENST00000484130 612 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 MIR4745-201ENST00000577608 62 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 AL359258.3-201ENST00000622910 2331 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 FGD5P1-202ENST00000614866 2498 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 AL138799.1-201ENST00000448213 1675 ntBASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CCSER1Q9C0I3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms