Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 TIMM8BP1-201ENST00000452384 211 ntBASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 KRT8P23-201ENST00000560090 1207 ntBASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AMBRA1Q9C0C7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AP3S2-216ENST00000617003 1561 ntBASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AZGP1P1-201ENST00000411909 902 ntBASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 RFPL4AP1-201ENST00000530883 850 ntBASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AC027612.4-201ENST00000605371 583 ntBASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AC026979.3-201ENST00000607315 403 ntBASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.53□□□□□ -0.08
AMBRA1Q9C0C7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AMBRA1Q9C0C7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms