Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTPN18Q99952 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 AC020910.5-201ENST00000623668 1865 ntBASIC17.42■□□□□ 0.38
PTPN18Q99952 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPN18Q99952 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN18Q99952 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN18Q99952 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN18Q99952 DNM1P30-201ENST00000563586 452 ntBASIC17.42■□□□□ 0.38
PTPN18Q99952 AC008805.1-201ENST00000590892 364 ntBASIC17.42■□□□□ 0.38
PTPN18Q99952 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN18Q99952 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTPN18Q99952 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN18Q99952 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PTPN18Q99952 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPN18Q99952 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN18Q99952 MST1L-201ENST00000442552 2185 ntBASIC17.42■□□□□ 0.38
PTPN18Q99952 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN18Q99952 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN18Q99952 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PTPN18Q99952 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PTPN18Q99952 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 RPS9P1-201ENST00000419943 583 ntBASIC17.41■□□□□ 0.38
PTPN18Q99952 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 SCARNA21-201ENST00000517026 139 ntBASIC17.41■□□□□ 0.38
PTPN18Q99952 POU5F1P2-201ENST00000521750 823 ntBASIC17.41■□□□□ 0.38
PTPN18Q99952 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PTPN18Q99952 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN18Q99952 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN18Q99952 AC127383.1-201ENST00000444697 1800 ntBASIC17.41■□□□□ 0.38
PTPN18Q99952 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 AC244394.1-201ENST00000435000 1665 ntBASIC17.41■□□□□ 0.38
PTPN18Q99952 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 AC074138.1-201ENST00000611182 1303 ntBASIC17.41■□□□□ 0.38
PTPN18Q99952 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN18Q99952 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN18Q99952 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTPN18Q99952 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
PTPN18Q99952 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC239868.1-201ENST00000369385 493 ntBASIC17.4■□□□□ 0.38
PTPN18Q99952 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC234644.1-201ENST00000406065 370 ntBASIC17.4■□□□□ 0.38
PTPN18Q99952 FAM58BP-201ENST00000439056 645 ntBASIC17.4■□□□□ 0.38
PTPN18Q99952 RN7SL67P-201ENST00000492147 296 ntBASIC17.4■□□□□ 0.38
PTPN18Q99952 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.4■□□□□ 0.38
PTPN18Q99952 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN18Q99952 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC138696.2-201ENST00000607376 223 ntBASIC17.4■□□□□ 0.38
PTPN18Q99952 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN18Q99952 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN18Q99952 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PTPN18Q99952 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTPN18Q99952 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN18Q99952 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms