Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AC024293.1-201ENST00000467930 498 ntBASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AC092850.2-201ENST00000623821 2697 ntBASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AL627230.2-201ENST00000613254 655 ntBASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AC020916.1-201ENST00000587762 1774 ntBASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 CHMP1AP1-201ENST00000445563 662 ntBASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 AC245100.5-201ENST00000452108 331 ntBASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 KRT8P29-201ENST00000420409 1371 ntBASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 KRT17P4-201ENST00000429445 819 ntBASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 AC009955.4-201ENST00000597192 544 ntBASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 MST1L-201ENST00000442552 2185 ntBASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 LYPLA2P1-203ENST00000447689 696 ntBASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CSMD1Q96PZ7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CSMD1Q96PZ7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CSMD1Q96PZ7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AC090164.2-201ENST00000611487 516 ntBASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms