Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC44A1Q8WWI5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 INTS4P1-203ENST00000641008 3683 ntBASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 AL133267.1-201ENST00000398220 340 ntBASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 KRT18P32-201ENST00000424695 1287 ntBASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 AC005237.2-201ENST00000434368 219 ntBASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 ALG1L5P-201ENST00000482043 771 ntBASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 PGAM5P1-201ENST00000518923 814 ntBASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 AC003101.2-201ENST00000612557 442 ntBASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A1Q8WWI5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 AC018442.1-201ENST00000421439 2061 ntBASIC15.52■□□□□ 0.07
SLC44A1Q8WWI5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 AL035456.1-201ENST00000456064 1369 ntBASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 Z97205.2-201ENST00000564697 1639 ntBASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 KRT18P64-201ENST00000434946 1219 ntBASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 AC097359.2-201ENST00000604992 2389 ntBASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A1Q8WWI5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms