Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 AL135901.1-201ENST00000451812 333 ntBASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 RNA5SP417-201ENST00000516459 108 ntBASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 RPS5-204ENST00000598098 536 ntTSL 2 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 BX088702.1-201ENST00000610784 235 ntBASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 AHCYP4-201ENST00000419201 1315 ntBASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL22A1Q8NFW1 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 MME-218ENST00000625667 363 ntTSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 AC106047.2-201ENST00000511723 743 ntBASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 PEBP1P2-201ENST00000603980 558 ntBASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL22A1Q8NFW1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 RN7SKP109-201ENST00000410592 316 ntBASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AC055811.3-201ENST00000584952 686 ntBASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AP000322.3-201ENST00000608665 388 ntBASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AC027601.3-201ENST00000622907 509 ntBASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL22A1Q8NFW1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms