Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 AC011270.2-201ENST00000624293 2550 ntBASIC14.52□□□□□ -0.09
NUP43Q8NFH3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.52□□□□□ -0.09
NUP43Q8NFH3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.51□□□□□ -0.09
NUP43Q8NFH3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 WASH3P-207ENST00000560956 1394 ntBASIC14.51□□□□□ -0.09
NUP43Q8NFH3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 AL512638.1-201ENST00000457493 794 ntBASIC14.51□□□□□ -0.09
NUP43Q8NFH3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 AC092337.1-201ENST00000568699 1129 ntBASIC14.51□□□□□ -0.09
NUP43Q8NFH3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 MROH4P-201ENST00000431302 1578 ntBASIC14.51□□□□□ -0.09
NUP43Q8NFH3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NUP43Q8NFH3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 FAM8A3P-201ENST00000427218 844 ntBASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AC004890.2-204ENST00000481968 304 ntBASIC14.5□□□□□ -0.09
NUP43Q8NFH3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AC135586.1-201ENST00000539323 574 ntBASIC14.5□□□□□ -0.09
NUP43Q8NFH3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 AC022144.1-201ENST00000602255 1580 ntBASIC14.5□□□□□ -0.09
NUP43Q8NFH3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.5□□□□□ -0.09
NUP43Q8NFH3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms