Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 SPDYE19P-201ENST00000338590 713 ntBASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 MEP1AP4-201ENST00000423244 1087 ntBASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 AC004790.1-201ENST00000612686 536 ntBASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM35BQ8NCS4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM35BQ8NCS4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TMEM35BQ8NCS4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TMEM35BQ8NCS4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
TMEM35BQ8NCS4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM35BQ8NCS4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM35BQ8NCS4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AC023310.3-201ENST00000557027 670 ntBASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AC100756.1-201ENST00000562736 682 ntBASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AC138749.3-201ENST00000567691 622 ntBASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AC116165.1-201ENST00000611806 668 ntBASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 AC009118.2-201ENST00000613275 655 ntBASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM35BQ8NCS4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM35BQ8NCS4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms