Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AL158070.2-201ENST00000623713 1621 ntBASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AC093433.1-201ENST00000458048 571 ntBASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 USP32P1-208ENST00000506594 1164 ntBASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AC009486.1-201ENST00000569860 813 ntBASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AC015936.2-201ENST00000593177 259 ntBASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C9orf40Q8IXQ3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 RNU1-114P-201ENST00000365297 166 ntBASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 AC022137.2-201ENST00000503482 481 ntBASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 AC068587.3-201ENST00000526613 355 ntBASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 PTP4A1P2-201ENST00000546033 454 ntBASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms