Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.47■□□□□ 0.07
APLFQ8IW19 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 AC148477.4-201ENST00000613430 1793 ntBASIC15.47■□□□□ 0.07
APLFQ8IW19 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 AC138969.2-201ENST00000532739 9932 ntBASIC15.47■□□□□ 0.07
APLFQ8IW19 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 GK-202ENST00000378941 458 ntTSL 3 BASIC15.47■□□□□ 0.07
APLFQ8IW19 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.47■□□□□ 0.07
APLFQ8IW19 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.47■□□□□ 0.07
APLFQ8IW19 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.47■□□□□ 0.07
APLFQ8IW19 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 AC105233.2-201ENST00000523697 349 ntBASIC15.47■□□□□ 0.07
APLFQ8IW19 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 AF228730.5-201ENST00000530288 346 ntBASIC15.47■□□□□ 0.07
APLFQ8IW19 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.47■□□□□ 0.07
APLFQ8IW19 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 CR383656.12-201ENST00000549567 513 ntBASIC15.47■□□□□ 0.07
APLFQ8IW19 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 MPDU1-223ENST00000582151 728 ntBASIC15.47■□□□□ 0.07
APLFQ8IW19 AC021097.1-201ENST00000607902 574 ntBASIC15.47■□□□□ 0.07
APLFQ8IW19 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
APLFQ8IW19 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
APLFQ8IW19 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
APLFQ8IW19 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.47■□□□□ 0.07
APLFQ8IW19 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
APLFQ8IW19 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.46■□□□□ 0.07
APLFQ8IW19 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.46■□□□□ 0.07
APLFQ8IW19 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.46■□□□□ 0.07
APLFQ8IW19 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.46■□□□□ 0.07
APLFQ8IW19 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
APLFQ8IW19 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
APLFQ8IW19 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.46■□□□□ 0.07
APLFQ8IW19 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.46■□□□□ 0.07
APLFQ8IW19 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.46■□□□□ 0.07
APLFQ8IW19 AC018529.1-201ENST00000613063 361 ntBASIC15.46■□□□□ 0.07
APLFQ8IW19 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.46■□□□□ 0.07
APLFQ8IW19 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms