Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 DFFBP1-201ENST00000433250 979 ntBASIC18.28■□□□□ 0.52
CHST3Q7LGC8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 AC007431.3-201ENST00000623221 587 ntBASIC18.28■□□□□ 0.52
CHST3Q7LGC8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHST3Q7LGC8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.27■□□□□ 0.52
CHST3Q7LGC8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 VDAC1P7-201ENST00000462417 847 ntBASIC18.27■□□□□ 0.52
CHST3Q7LGC8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 CTBP2P3-201ENST00000585629 1255 ntBASIC18.27■□□□□ 0.52
CHST3Q7LGC8 AL049840.4-201ENST00000602422 811 ntBASIC18.27■□□□□ 0.52
CHST3Q7LGC8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 AL358472.5-202ENST00000641448 1267 ntBASIC18.27■□□□□ 0.52
CHST3Q7LGC8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHST3Q7LGC8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.27■□□□□ 0.51
CHST3Q7LGC8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.27■□□□□ 0.51
CHST3Q7LGC8 AC126365.1-201ENST00000578585 1514 ntBASIC18.27■□□□□ 0.51
CHST3Q7LGC8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHST3Q7LGC8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CHST3Q7LGC8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.27■□□□□ 0.51
CHST3Q7LGC8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHST3Q7LGC8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 TNRC18P2-201ENST00000417666 2714 ntBASIC18.26■□□□□ 0.51
CHST3Q7LGC8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 GK-202ENST00000378941 458 ntTSL 3 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 MYCLP2-201ENST00000449268 967 ntBASIC18.26■□□□□ 0.51
CHST3Q7LGC8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHST3Q7LGC8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms