Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 BCRP6-201ENST00000510112 632 ntBASIC18.36■□□□□ 0.53
CTR9Q6PD62 BCRP7-201ENST00000511549 544 ntBASIC18.36■□□□□ 0.53
CTR9Q6PD62 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 AC020658.6-201ENST00000623564 1870 ntBASIC18.35■□□□□ 0.53
CTR9Q6PD62 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 PAUPAR-201ENST00000630360 2965 ntBASIC18.35■□□□□ 0.53
CTR9Q6PD62 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 AC134312.5-201ENST00000568031 1313 ntBASIC18.35■□□□□ 0.53
CTR9Q6PD62 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 AC005229.1-201ENST00000392885 409 ntBASIC18.35■□□□□ 0.53
CTR9Q6PD62 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 AC022137.2-201ENST00000503482 481 ntBASIC18.35■□□□□ 0.53
CTR9Q6PD62 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 SNX29P1-201ENST00000548357 1007 ntBASIC18.35■□□□□ 0.53
CTR9Q6PD62 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.35■□□□□ 0.53
CTR9Q6PD62 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTR9Q6PD62 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 AC092933.1-201ENST00000393644 945 ntBASIC18.34■□□□□ 0.53
CTR9Q6PD62 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 MIR1909-201ENST00000411312 80 ntBASIC18.34■□□□□ 0.53
CTR9Q6PD62 AC022210.1-201ENST00000449856 793 ntBASIC18.34■□□□□ 0.53
CTR9Q6PD62 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 AL008721.1-201ENST00000609964 604 ntBASIC18.34■□□□□ 0.53
CTR9Q6PD62 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.34■□□□□ 0.53
CTR9Q6PD62 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTR9Q6PD62 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTR9Q6PD62 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTR9Q6PD62 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CTR9Q6PD62 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CTR9Q6PD62 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTR9Q6PD62 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTR9Q6PD62 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTR9Q6PD62 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.33■□□□□ 0.53
CTR9Q6PD62 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTR9Q6PD62 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms