Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 AC009093.7-201ENST00000623853 1223 ntBASIC15.87■□□□□ 0.13
CASC4Q6P4E1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 RPSAP43-201ENST00000402237 625 ntBASIC15.86■□□□□ 0.13
CASC4Q6P4E1 SPDYE17-201ENST00000412399 783 ntBASIC15.86■□□□□ 0.13
CASC4Q6P4E1 UPF3AP3-201ENST00000420996 769 ntBASIC15.86■□□□□ 0.13
CASC4Q6P4E1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 AL133215.2-201ENST00000609242 977 ntBASIC15.86■□□□□ 0.13
CASC4Q6P4E1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CASC4Q6P4E1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 SPDYE7P-202ENST00000420373 878 ntBASIC15.85■□□□□ 0.13
CASC4Q6P4E1 HIST3H2BA-201ENST00000436555 524 ntBASIC15.85■□□□□ 0.13
CASC4Q6P4E1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.85■□□□□ 0.13
CASC4Q6P4E1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms