Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.77■□□□□ 0.76
TWISTNBQ3B726 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TWISTNBQ3B726 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TWISTNBQ3B726 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TWISTNBQ3B726 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TWISTNBQ3B726 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TWISTNBQ3B726 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TWISTNBQ3B726 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TWISTNBQ3B726 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 BAATP1-201ENST00000412284 1225 ntBASIC19.76■□□□□ 0.75
TWISTNBQ3B726 AC012441.1-201ENST00000446669 685 ntBASIC19.76■□□□□ 0.75
TWISTNBQ3B726 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWISTNBQ3B726 AC091951.1-201ENST00000512854 2465 ntBASIC19.76■□□□□ 0.75
TWISTNBQ3B726 AC006486.2-201ENST00000624246 2199 ntBASIC19.76■□□□□ 0.75
TWISTNBQ3B726 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AL645937.2-201ENST00000396808 931 ntBASIC19.75■□□□□ 0.75
TWISTNBQ3B726 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AP001889.1-201ENST00000525414 633 ntBASIC19.75■□□□□ 0.75
TWISTNBQ3B726 SLC25A47P1-201ENST00000531577 414 ntBASIC19.75■□□□□ 0.75
TWISTNBQ3B726 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AC239800.4-201ENST00000603712 296 ntBASIC19.75■□□□□ 0.75
TWISTNBQ3B726 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AP000845.1-201ENST00000581677 2131 ntBASIC19.75■□□□□ 0.75
TWISTNBQ3B726 AC134312.5-201ENST00000568031 1313 ntBASIC19.75■□□□□ 0.75
TWISTNBQ3B726 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TWISTNBQ3B726 MROH4P-201ENST00000431302 1578 ntBASIC19.74■□□□□ 0.75
TWISTNBQ3B726 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TWISTNBQ3B726 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TWISTNBQ3B726 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TWISTNBQ3B726 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TWISTNBQ3B726 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms