Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.07■□□□□ 0.48
IRX3P78415 GPAA1P2-201ENST00000417923 928 ntBASIC18.07■□□□□ 0.48
IRX3P78415 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.07■□□□□ 0.48
IRX3P78415 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IRX3P78415 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IRX3P78415 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.07■□□□□ 0.48
IRX3P78415 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX3P78415 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.07■□□□□ 0.48
IRX3P78415 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.07■□□□□ 0.48
IRX3P78415 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IRX3P78415 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.06■□□□□ 0.48
IRX3P78415 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
IRX3P78415 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX3P78415 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.06■□□□□ 0.48
IRX3P78415 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.06■□□□□ 0.48
IRX3P78415 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.06■□□□□ 0.48
IRX3P78415 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.06■□□□□ 0.48
IRX3P78415 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX3P78415 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
IRX3P78415 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.06■□□□□ 0.48
IRX3P78415 AP005019.2-201ENST00000615104 511 ntBASIC18.06■□□□□ 0.48
IRX3P78415 AC138951.2-201ENST00000623455 1161 ntBASIC18.06■□□□□ 0.48
IRX3P78415 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.06■□□□□ 0.48
IRX3P78415 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.06■□□□□ 0.48
IRX3P78415 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IRX3P78415 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
IRX3P78415 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.05■□□□□ 0.48
IRX3P78415 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
IRX3P78415 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.05■□□□□ 0.48
IRX3P78415 MIR648-201ENST00000385046 94 ntBASIC18.05■□□□□ 0.48
IRX3P78415 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.05■□□□□ 0.48
IRX3P78415 FAM197Y7-201ENST00000432892 766 ntBASIC18.05■□□□□ 0.48
IRX3P78415 FAM86HP-204ENST00000513466 959 ntBASIC18.05■□□□□ 0.48
IRX3P78415 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.05■□□□□ 0.48
IRX3P78415 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.05■□□□□ 0.48
IRX3P78415 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.05■□□□□ 0.48
IRX3P78415 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.05■□□□□ 0.48
IRX3P78415 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.05■□□□□ 0.48
IRX3P78415 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.05■□□□□ 0.48
IRX3P78415 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.05■□□□□ 0.48
IRX3P78415 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
IRX3P78415 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
IRX3P78415 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.05■□□□□ 0.48
IRX3P78415 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
IRX3P78415 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.05■□□□□ 0.48
IRX3P78415 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
IRX3P78415 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
IRX3P78415 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms