Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 AC013268.4-201ENST00000637413 2228 ntBASIC20.19■□□□□ 0.82
RIPK4P57078 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RIPK4P57078 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK4P57078 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RIPK4P57078 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.18■□□□□ 0.82
RIPK4P57078 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.18■□□□□ 0.82
RIPK4P57078 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 AL359258.3-201ENST00000622910 2331 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.18■□□□□ 0.82
RIPK4P57078 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 RNU1-114P-201ENST00000365297 166 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.18■□□□□ 0.82
RIPK4P57078 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 BCRP2-202ENST00000447763 634 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 BCRP6-201ENST00000510112 632 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 BCRP7-201ENST00000511549 544 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.18■□□□□ 0.82
RIPK4P57078 KRT17P8-201ENST00000540749 863 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 AC106886.1-201ENST00000568660 600 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.18■□□□□ 0.82
RIPK4P57078 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.18■□□□□ 0.82
RIPK4P57078 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.18■□□□□ 0.82
RIPK4P57078 PRSS30P-206ENST00000641773 873 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RIPK4P57078 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.18■□□□□ 0.82
RIPK4P57078 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 AC018665.1-201ENST00000622927 1362 ntBASIC20.18■□□□□ 0.82
RIPK4P57078 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK4P57078 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RIPK4P57078 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK4P57078 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 AC023024.2-201ENST00000623561 1993 ntBASIC20.17■□□□□ 0.82
RIPK4P57078 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 AC148477.4-201ENST00000613430 1793 ntBASIC20.17■□□□□ 0.82
RIPK4P57078 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 GHSR-202ENST00000427970 912 ntBASIC20.17■□□□□ 0.82
RIPK4P57078 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.17■□□□□ 0.82
RIPK4P57078 CROCCP4-201ENST00000457096 498 ntBASIC20.17■□□□□ 0.82
RIPK4P57078 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.17■□□□□ 0.82
RIPK4P57078 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.17■□□□□ 0.82
RIPK4P57078 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.17■□□□□ 0.82
RIPK4P57078 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.17■□□□□ 0.82
RIPK4P57078 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RIPK4P57078 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.17■□□□□ 0.82
RIPK4P57078 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK4P57078 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
RIPK4P57078 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK4P57078 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK4P57078 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RIPK4P57078 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.16■□□□□ 0.82
RIPK4P57078 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK4P57078 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.16■□□□□ 0.82
RIPK4P57078 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.16■□□□□ 0.82
RIPK4P57078 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK4P57078 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
RIPK4P57078 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.16■□□□□ 0.82
RIPK4P57078 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.16■□□□□ 0.82
RIPK4P57078 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms