Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 AC136604.1-201ENST00000418535 575 ntBASIC14.25□□□□□ -0.13
CLDN20P56880 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN20P56880 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN20P56880 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN20P56880 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.25□□□□□ -0.13
CLDN20P56880 AF228730.6-201ENST00000641497 218 ntBASIC14.25□□□□□ -0.13
CLDN20P56880 AC084121.3-201ENST00000641716 218 ntBASIC14.25□□□□□ -0.13
CLDN20P56880 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 AL607033.1-201ENST00000623900 1599 ntBASIC14.25□□□□□ -0.13
CLDN20P56880 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN20P56880 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN20P56880 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CLDN20P56880 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN20P56880 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN20P56880 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CLDN20P56880 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN20P56880 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 CICP14-201ENST00000629111 2732 ntBASIC14.24□□□□□ -0.13
CLDN20P56880 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 AC007541.1-201ENST00000570282 1469 ntBASIC14.24□□□□□ -0.13
CLDN20P56880 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN20P56880 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms