Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.54□□□□□ -0.24
FOXG1P55316 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 AC092384.3-202ENST00000564646 2873 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
FOXG1P55316 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 AC023024.2-201ENST00000623561 1993 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXG1P55316 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXG1P55316 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
FOXG1P55316 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.54□□□□□ -0.24
FOXG1P55316 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.53□□□□□ -0.24
FOXG1P55316 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXG1P55316 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXG1P55316 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
FOXG1P55316 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
FOXG1P55316 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXG1P55316 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
FOXG1P55316 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
FOXG1P55316 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 RPL5P21-201ENST00000404620 815 ntBASIC13.53□□□□□ -0.24
FOXG1P55316 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.53□□□□□ -0.24
FOXG1P55316 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.53□□□□□ -0.24
FOXG1P55316 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.53□□□□□ -0.24
FOXG1P55316 ENPP7P5-201ENST00000541031 1031 ntBASIC13.53□□□□□ -0.24
FOXG1P55316 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXG1P55316 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.53□□□□□ -0.24
FOXG1P55316 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXG1P55316 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.53□□□□□ -0.24
FOXG1P55316 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.53□□□□□ -0.24
FOXG1P55316 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXG1P55316 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 KRT8P44-201ENST00000441609 1350 ntBASIC13.53□□□□□ -0.24
FOXG1P55316 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXG1P55316 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXG1P55316 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXG1P55316 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
FOXG1P55316 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
FOXG1P55316 AC007787.1-201ENST00000588095 1583 ntBASIC13.53□□□□□ -0.24
FOXG1P55316 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.53□□□□□ -0.24
FOXG1P55316 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXG1P55316 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXG1P55316 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXG1P55316 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
FOXG1P55316 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.52□□□□□ -0.24
FOXG1P55316 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXG1P55316 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXG1P55316 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.52□□□□□ -0.24
FOXG1P55316 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
FOXG1P55316 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXG1P55316 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.52□□□□□ -0.24
FOXG1P55316 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
FOXG1P55316 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXG1P55316 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.52□□□□□ -0.24
FOXG1P55316 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
FOXG1P55316 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXG1P55316 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXG1P55316 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXG1P55316 CROCCP4-201ENST00000457096 498 ntBASIC13.52□□□□□ -0.25
FOXG1P55316 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXG1P55316 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms