Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC114501.2-201ENST00000439631 535 ntBASIC16.14■□□□□ 0.17
CDH6P55285 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH6P55285 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH6P55285 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH6P55285 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH6P55285 AC009407.1-201ENST00000568958 598 ntBASIC16.14■□□□□ 0.17
CDH6P55285 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDH6P55285 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDH6P55285 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH6P55285 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH6P55285 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH6P55285 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH6P55285 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH6P55285 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH6P55285 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH6P55285 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH6P55285 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH6P55285 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH6P55285 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH6P55285 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH6P55285 AC025181.2-201ENST00000606994 802 ntBASIC16.13■□□□□ 0.17
CDH6P55285 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CDH6P55285 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH6P55285 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH6P55285 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH6P55285 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH6P55285 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH6P55285 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH6P55285 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH6P55285 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDH6P55285 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH6P55285 BTBD7P1-201ENST00000447253 1453 ntBASIC16.12■□□□□ 0.17
CDH6P55285 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH6P55285 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH6P55285 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH6P55285 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH6P55285 BASP1P1-201ENST00000430708 665 ntBASIC16.12■□□□□ 0.17
CDH6P55285 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH6P55285 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH6P55285 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CDH6P55285 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH6P55285 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH6P55285 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CDH6P55285 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.12■□□□□ 0.17
CDH6P55285 AC092337.1-201ENST00000568699 1129 ntBASIC16.12■□□□□ 0.17
CDH6P55285 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDH6P55285 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH6P55285 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH6P55285 AL390955.2-201ENST00000603032 514 ntBASIC16.12■□□□□ 0.17
CDH6P55285 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH6P55285 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH6P55285 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDH6P55285 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CDH6P55285 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH6P55285 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms