Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ATXN3P54252 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 AC093724.1-201ENST00000448659 1027 ntBASIC15.92■□□□□ 0.14
ATXN3P54252 AL589987.1-201ENST00000453380 819 ntBASIC15.92■□□□□ 0.14
ATXN3P54252 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.92■□□□□ 0.14
ATXN3P54252 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.92■□□□□ 0.14
ATXN3P54252 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.92■□□□□ 0.14
ATXN3P54252 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 REXO1L8P-201ENST00000604378 1897 ntBASIC15.92■□□□□ 0.14
ATXN3P54252 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.92■□□□□ 0.14
ATXN3P54252 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.92■□□□□ 0.14
ATXN3P54252 GGT3P-204ENST00000453783 1664 ntBASIC15.92■□□□□ 0.14
ATXN3P54252 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.92■□□□□ 0.14
ATXN3P54252 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATXN3P54252 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
ATXN3P54252 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.92■□□□□ 0.14
ATXN3P54252 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.91■□□□□ 0.14
ATXN3P54252 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.91■□□□□ 0.14
ATXN3P54252 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.91■□□□□ 0.14
ATXN3P54252 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.91■□□□□ 0.14
ATXN3P54252 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.91■□□□□ 0.14
ATXN3P54252 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.91■□□□□ 0.14
ATXN3P54252 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ATXN3P54252 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ATXN3P54252 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
ATXN3P54252 AC098850.1-201ENST00000419919 790 ntBASIC15.91■□□□□ 0.14
ATXN3P54252 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.91■□□□□ 0.14
ATXN3P54252 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.91■□□□□ 0.14
ATXN3P54252 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.91■□□□□ 0.14
ATXN3P54252 AC074044.1-201ENST00000609673 707 ntBASIC15.91■□□□□ 0.14
ATXN3P54252 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.91■□□□□ 0.14
ATXN3P54252 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.91■□□□□ 0.14
ATXN3P54252 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
ATXN3P54252 PPT1-215ENST00000641471 2368 ntBASIC15.91■□□□□ 0.14
ATXN3P54252 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ATXN3P54252 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATXN3P54252 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATXN3P54252 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATXN3P54252 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATXN3P54252 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms