Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.39□□□□□ -0.27
HCFC1P51610 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 SPCS2P2-201ENST00000603270 608 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HCFC1P51610 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 AC091812.3-201ENST00000621362 345 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.39□□□□□ -0.27
HCFC1P51610 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
HCFC1P51610 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HCFC1P51610 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.38□□□□□ -0.27
HCFC1P51610 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HCFC1P51610 AC104457.1-201ENST00000401024 814 ntBASIC13.38□□□□□ -0.27
HCFC1P51610 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.38□□□□□ -0.27
HCFC1P51610 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.38□□□□□ -0.27
HCFC1P51610 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.38□□□□□ -0.27
HCFC1P51610 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HCFC1P51610 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.38□□□□□ -0.27
HCFC1P51610 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
HCFC1P51610 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.38□□□□□ -0.27
HCFC1P51610 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.38□□□□□ -0.27
HCFC1P51610 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.38□□□□□ -0.27
HCFC1P51610 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.38□□□□□ -0.27
HCFC1P51610 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HCFC1P51610 AC105917.1-201ENST00000506637 2539 ntBASIC13.38□□□□□ -0.27
HCFC1P51610 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 MIR769-201ENST00000390225 118 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 AC016700.1-201ENST00000429424 312 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.37□□□□□ -0.27
HCFC1P51610 FTLP1-201ENST00000449155 526 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.37□□□□□ -0.27
HCFC1P51610 AC245884.6-201ENST00000515672 1067 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 AC103702.1-201ENST00000548801 2630 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HCFC1P51610 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.37□□□□□ -0.27
HCFC1P51610 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 EEF1DP6-201ENST00000449232 372 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 RN7SL769P-201ENST00000469386 295 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.37□□□□□ -0.27
HCFC1P51610 AC126915.1-201ENST00000522847 1038 ntBASIC13.37□□□□□ -0.27
HCFC1P51610 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.37□□□□□ -0.27
HCFC1P51610 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms