Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CLCN1P35523 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN1P35523 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.69■□□□□ 0.42
CLCN1P35523 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN1P35523 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.69■□□□□ 0.42
CLCN1P35523 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN1P35523 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 AC007064.4-201ENST00000637740 555 ntBASIC17.69■□□□□ 0.42
CLCN1P35523 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CLCN1P35523 AC025580.3-201ENST00000617932 1424 ntBASIC17.69■□□□□ 0.42
CLCN1P35523 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLCN1P35523 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLCN1P35523 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN1P35523 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLCN1P35523 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.68■□□□□ 0.42
CLCN1P35523 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.68■□□□□ 0.42
CLCN1P35523 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CLCN1P35523 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 AC021097.1-201ENST00000607902 574 ntBASIC17.68■□□□□ 0.42
CLCN1P35523 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.68■□□□□ 0.42
CLCN1P35523 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLCN1P35523 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN1P35523 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 BCAR1-209ENST00000546196 1340 ntBASIC17.68■□□□□ 0.42
CLCN1P35523 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CLCN1P35523 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN1P35523 AC130686.1-201ENST00000622936 2466 ntBASIC17.67■□□□□ 0.42
CLCN1P35523 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 AMT-221ENST00000538581 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN1P35523 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 PID1-202ENST00000392054 2745 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN1P35523 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLCN1P35523 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLCN1P35523 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCN1P35523 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLCN1P35523 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
CLCN1P35523 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
CLCN1P35523 KRT19P2-202ENST00000557173 1012 ntBASIC17.67■□□□□ 0.42
CLCN1P35523 AC106730.1-201ENST00000566722 1090 ntBASIC17.67■□□□□ 0.42
CLCN1P35523 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms