Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.15□□□□□ -0.14
CD53P19397 ARSEP1-201ENST00000420443 635 ntBASIC14.15□□□□□ -0.14
CD53P19397 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 AC009477.1-201ENST00000452936 217 ntBASIC14.15□□□□□ -0.14
CD53P19397 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.15□□□□□ -0.14
CD53P19397 TP53TG3HP-202ENST00000569755 579 ntBASIC14.15□□□□□ -0.14
CD53P19397 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.15□□□□□ -0.14
CD53P19397 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.15□□□□□ -0.14
CD53P19397 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 AC026748.1-201ENST00000624349 3251 ntBASIC14.15□□□□□ -0.14
CD53P19397 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 AC007191.1-201ENST00000623179 2995 ntBASIC14.15□□□□□ -0.14
CD53P19397 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CD53P19397 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
CD53P19397 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 AC092127.1-201ENST00000567093 3455 ntBASIC14.14□□□□□ -0.15
CD53P19397 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.14□□□□□ -0.15
CD53P19397 U91328.1-201ENST00000437528 223 ntBASIC14.14□□□□□ -0.15
CD53P19397 KRT18P34-201ENST00000488218 1270 ntBASIC14.14□□□□□ -0.15
CD53P19397 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.14□□□□□ -0.15
CD53P19397 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.14□□□□□ -0.15
CD53P19397 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 LINC00528-201ENST00000600723 2160 ntBASIC14.14□□□□□ -0.15
CD53P19397 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.14□□□□□ -0.15
CD53P19397 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CD53P19397 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
CD53P19397 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD53P19397 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.13□□□□□ -0.15
CD53P19397 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.13□□□□□ -0.15
CD53P19397 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 AL035456.1-201ENST00000456064 1369 ntBASIC14.13□□□□□ -0.15
CD53P19397 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CD53P19397 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.13□□□□□ -0.15
CD53P19397 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.13□□□□□ -0.15
CD53P19397 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.13□□□□□ -0.15
CD53P19397 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.13□□□□□ -0.15
CD53P19397 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.13□□□□□ -0.15
CD53P19397 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.13□□□□□ -0.15
CD53P19397 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CD53P19397 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms