Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCL4P13236 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL4P13236 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL4P13236 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL4P13236 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL4P13236 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCL4P13236 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL4P13236 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL4P13236 KRT8P4-201ENST00000509735 1454 ntBASIC14.5□□□□□ -0.09
CCL4P13236 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CCL4P13236 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL4P13236 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCL4P13236 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.5□□□□□ -0.09
CCL4P13236 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CCL4P13236 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.49□□□□□ -0.09
CCL4P13236 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
CCL4P13236 AC009090.5-201ENST00000624886 2285 ntBASIC14.49□□□□□ -0.09
CCL4P13236 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CCL4P13236 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.49□□□□□ -0.09
CCL4P13236 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.49□□□□□ -0.09
CCL4P13236 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.49□□□□□ -0.09
CCL4P13236 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.49□□□□□ -0.09
CCL4P13236 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CCL4P13236 AL391280.1-201ENST00000506969 1062 ntBASIC14.49□□□□□ -0.09
CCL4P13236 AC126915.1-201ENST00000522847 1038 ntBASIC14.49□□□□□ -0.09
CCL4P13236 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 AP003171.2-201ENST00000528208 925 ntBASIC14.49□□□□□ -0.09
CCL4P13236 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.49□□□□□ -0.09
CCL4P13236 RN7SL713P-201ENST00000582127 302 ntBASIC14.49□□□□□ -0.09
CCL4P13236 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.49□□□□□ -0.09
CCL4P13236 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.49□□□□□ -0.09
CCL4P13236 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCL4P13236 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCL4P13236 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CCL4P13236 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
CCL4P13236 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.49□□□□□ -0.09
CCL4P13236 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCL4P13236 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL4P13236 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CCL4P13236 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL4P13236 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL4P13236 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 TNRC18P3-201ENST00000441896 2691 ntBASIC14.48□□□□□ -0.09
CCL4P13236 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL4P13236 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL4P13236 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CCL4P13236 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL4P13236 RNA5SP423-201ENST00000517127 109 ntBASIC14.48□□□□□ -0.09
CCL4P13236 AC007663.3-201ENST00000609632 465 ntBASIC14.48□□□□□ -0.09
CCL4P13236 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL4P13236 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL4P13236 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL4P13236 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms