Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC26.35■■□□□ 1.81
TOP2AP11388 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
TOP2AP11388 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
TOP2AP11388 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC26.34■■□□□ 1.81
TOP2AP11388 VPS18-202ENST00000558474 873 ntTSL 3 BASIC26.34■■□□□ 1.81
TOP2AP11388 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
TOP2AP11388 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
TOP2AP11388 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC26.34■■□□□ 1.81
TOP2AP11388 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 AC078991.1-201ENST00000437297 610 ntBASIC26.34■■□□□ 1.81
TOP2AP11388 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC26.34■■□□□ 1.81
TOP2AP11388 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
TOP2AP11388 RPL17P45-201ENST00000586289 509 ntBASIC26.34■■□□□ 1.81
TOP2AP11388 HPN-206ENST00000597419 1212 ntTSL 5 BASIC26.34■■□□□ 1.81
TOP2AP11388 AC007718.1-201ENST00000621078 280 ntBASIC26.34■■□□□ 1.81
TOP2AP11388 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TOP2AP11388 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC26.33■■□□□ 1.81
TOP2AP11388 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC26.33■■□□□ 1.81
TOP2AP11388 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TOP2AP11388 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC26.33■■□□□ 1.81
TOP2AP11388 SKA2-202ENST00000437036 625 ntTSL 2 BASIC26.33■■□□□ 1.81
TOP2AP11388 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
TOP2AP11388 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
TOP2AP11388 DDX5-235ENST00000630471 473 ntTSL 4 BASIC26.33■■□□□ 1.81
TOP2AP11388 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC26.33■■□□□ 1.8
TOP2AP11388 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC26.33■■□□□ 1.8
TOP2AP11388 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
TOP2AP11388 AC018629.1-201ENST00000623381 1736 ntBASIC26.33■■□□□ 1.8
TOP2AP11388 PCDH8P1-201ENST00000428983 2773 ntBASIC26.33■■□□□ 1.8
TOP2AP11388 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TOP2AP11388 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC26.32■■□□□ 1.8
TOP2AP11388 AL590440.2-201ENST00000641973 1595 ntBASIC26.32■■□□□ 1.8
TOP2AP11388 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC26.32■■□□□ 1.8
TOP2AP11388 CTBP2P4-201ENST00000513884 920 ntBASIC26.32■■□□□ 1.8
TOP2AP11388 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC26.32■■□□□ 1.8
TOP2AP11388 AC133540.1-201ENST00000620845 1019 ntBASIC26.32■■□□□ 1.8
TOP2AP11388 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 LINC01165-201ENST00000445190 1623 ntBASIC26.32■■□□□ 1.8
TOP2AP11388 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TOP2AP11388 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
TOP2AP11388 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC26.31■■□□□ 1.8
TOP2AP11388 ZBED1P1-201ENST00000502364 1930 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 DKFZP434H168-201ENST00000567381 1905 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 AP005117.1-202ENST00000581724 1908 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC26.31■■□□□ 1.8
TOP2AP11388 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC26.31■■□□□ 1.8
TOP2AP11388 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TOP2AP11388 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 RN7SL8P-201ENST00000461771 266 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
TOP2AP11388 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TOP2AP11388 AC026803.1-201ENST00000569130 274 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 PHBP15-201ENST00000574228 665 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 AC092171.5-201ENST00000608012 942 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 BX088702.1-201ENST00000610784 235 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC26.31■■□□□ 1.8
TOP2AP11388 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC26.31■■□□□ 1.8
TOP2AP11388 AP000845.1-201ENST00000581677 2131 ntBASIC26.31■■□□□ 1.8
TOP2AP11388 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TOP2AP11388 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC26.31■■□□□ 1.8
TOP2AP11388 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TOP2AP11388 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC26.3■■□□□ 1.8
TOP2AP11388 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms