Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.84■□□□□ 0.29
CCDC172P0C7W6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC172P0C7W6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CCDC172P0C7W6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC172P0C7W6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 RPSAP43-201ENST00000402237 625 ntBASIC16.83■□□□□ 0.28
CCDC172P0C7W6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 AC023908.3-201ENST00000564211 3047 ntBASIC16.83■□□□□ 0.28
CCDC172P0C7W6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 AC010327.4-202ENST00000591484 748 ntBASIC16.83■□□□□ 0.28
CCDC172P0C7W6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC172P0C7W6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 CETN4P-206ENST00000642099 2168 ntBASIC16.82■□□□□ 0.28
CCDC172P0C7W6 AC023024.2-201ENST00000623561 1993 ntBASIC16.82■□□□□ 0.28
CCDC172P0C7W6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 AC084364.1-201ENST00000551967 1556 ntBASIC16.82■□□□□ 0.28
CCDC172P0C7W6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 AC254562.1-201ENST00000417586 456 ntBASIC16.82■□□□□ 0.28
CCDC172P0C7W6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 AL079307.3-201ENST00000556114 283 ntBASIC16.82■□□□□ 0.28
CCDC172P0C7W6 MIR4453-201ENST00000584019 89 ntBASIC16.82■□□□□ 0.28
CCDC172P0C7W6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 LINC01101-201ENST00000622953 1884 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms