Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 SAMD11P1-201ENST00000571429 661 ntBASIC18.51■□□□□ 0.55
CHGBP05060 GNRHR2-203ENST00000581100 1187 ntBASIC18.51■□□□□ 0.55
CHGBP05060 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.51■□□□□ 0.55
CHGBP05060 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 AC018665.1-201ENST00000622927 1362 ntBASIC18.51■□□□□ 0.55
CHGBP05060 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.51■□□□□ 0.55
CHGBP05060 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
CHGBP05060 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.5■□□□□ 0.55
CHGBP05060 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.5■□□□□ 0.55
CHGBP05060 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.5■□□□□ 0.55
CHGBP05060 ENPP7P5-201ENST00000541031 1031 ntBASIC18.5■□□□□ 0.55
CHGBP05060 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.5■□□□□ 0.55
CHGBP05060 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.5■□□□□ 0.55
CHGBP05060 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.5■□□□□ 0.55
CHGBP05060 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 MIR4259-201ENST00000584466 101 ntBASIC18.5■□□□□ 0.55
CHGBP05060 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.5■□□□□ 0.55
CHGBP05060 AC244669.2-201ENST00000612320 853 ntBASIC18.5■□□□□ 0.55
CHGBP05060 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHGBP05060 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHGBP05060 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHGBP05060 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHGBP05060 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHGBP05060 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.49■□□□□ 0.55
CHGBP05060 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.49■□□□□ 0.55
CHGBP05060 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.49■□□□□ 0.55
CHGBP05060 AC119751.2-201ENST00000504529 210 ntBASIC18.49■□□□□ 0.55
CHGBP05060 AC068587.3-201ENST00000526613 355 ntBASIC18.49■□□□□ 0.55
CHGBP05060 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CHGBP05060 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CHGBP05060 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.49■□□□□ 0.55
CHGBP05060 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.49■□□□□ 0.55
CHGBP05060 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.49■□□□□ 0.55
CHGBP05060 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.49■□□□□ 0.55
CHGBP05060 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHGBP05060 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms