Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.14□□□□□ -0.15
P04436 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.14□□□□□ -0.15
P04436 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.14□□□□□ -0.15
P04436 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.14□□□□□ -0.15
P04436 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
P04436 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.14□□□□□ -0.15
P04436 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.14□□□□□ -0.15
P04436 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.14□□□□□ -0.15
P04436 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
P04436 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
P04436 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.13□□□□□ -0.15
P04436 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
P04436 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.13□□□□□ -0.15
P04436 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
P04436 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
P04436 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.13□□□□□ -0.15
P04436 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.13□□□□□ -0.15
P04436 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 AC093433.1-201ENST00000458048 571 ntBASIC14.13□□□□□ -0.15
P04436 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.13□□□□□ -0.15
P04436 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.13□□□□□ -0.15
P04436 AC004066.1-201ENST00000502488 802 ntBASIC14.13□□□□□ -0.15
P04436 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.13□□□□□ -0.15
P04436 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.13□□□□□ -0.15
P04436 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.13□□□□□ -0.15
P04436 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.13□□□□□ -0.15
P04436 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 AL008721.1-201ENST00000609964 604 ntBASIC14.13□□□□□ -0.15
P04436 RPSAP52-203ENST00000622976 1023 ntBASIC14.13□□□□□ -0.15
P04436 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
P04436 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.13□□□□□ -0.15
P04436 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
P04436 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
P04436 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.12□□□□□ -0.15
P04436 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
P04436 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.12□□□□□ -0.15
P04436 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
P04436 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04436 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.12□□□□□ -0.15
P04436 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms