Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SPTA1P02549 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 FAM8A4P-201ENST00000435433 1213 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.98□□□□□ -0.17
SPTA1P02549 POU5F1P6-201ENST00000466990 990 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.98□□□□□ -0.17
SPTA1P02549 RN7SL713P-201ENST00000582127 302 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 AL450472.2-201ENST00000603663 1156 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.98□□□□□ -0.17
SPTA1P02549 AL023803.2-201ENST00000620080 638 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.98□□□□□ -0.17
SPTA1P02549 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SPTA1P02549 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 LINC02199-201ENST00000506655 2702 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SPTA1P02549 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.98□□□□□ -0.17
SPTA1P02549 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.98□□□□□ -0.17
SPTA1P02549 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.98□□□□□ -0.17
SPTA1P02549 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.98□□□□□ -0.17
SPTA1P02549 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.98□□□□□ -0.17
SPTA1P02549 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SPTA1P02549 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.98□□□□□ -0.17
SPTA1P02549 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.98□□□□□ -0.17
SPTA1P02549 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.98□□□□□ -0.17
SPTA1P02549 RN7SL596P-201ENST00000582123 288 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPTA1P02549 BX539320.1-201ENST00000623759 877 ntBASIC13.98□□□□□ -0.17
SPTA1P02549 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.98□□□□□ -0.17
SPTA1P02549 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SPTA1P02549 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.97□□□□□ -0.17
SPTA1P02549 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.97□□□□□ -0.17
SPTA1P02549 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 AC097065.1-201ENST00000425737 517 ntBASIC13.97□□□□□ -0.17
SPTA1P02549 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.97□□□□□ -0.17
SPTA1P02549 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SPTA1P02549 AC104073.2-201ENST00000453737 312 ntBASIC13.97□□□□□ -0.17
SPTA1P02549 RN7SL11P-201ENST00000471305 293 ntBASIC13.97□□□□□ -0.17
SPTA1P02549 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.97□□□□□ -0.17
SPTA1P02549 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SPTA1P02549 AC138894.2-201ENST00000602838 371 ntBASIC13.97□□□□□ -0.17
SPTA1P02549 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 AL662844.4-201ENST00000606367 2838 ntBASIC13.97□□□□□ -0.17
SPTA1P02549 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SPTA1P02549 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.97□□□□□ -0.17
SPTA1P02549 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPTA1P02549 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SPTA1P02549 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms