Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN11O75508 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 AP001889.1-201ENST00000525414 633 ntBASIC15.76■□□□□ 0.11
CLDN11O75508 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN11O75508 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN11O75508 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLDN11O75508 AC126365.1-201ENST00000578585 1514 ntBASIC15.76■□□□□ 0.11
CLDN11O75508 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN11O75508 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CLDN11O75508 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN11O75508 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN11O75508 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN11O75508 KRT8P44-201ENST00000441609 1350 ntBASIC15.75■□□□□ 0.11
CLDN11O75508 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN11O75508 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN11O75508 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN11O75508 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN11O75508 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLDN11O75508 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN11O75508 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN11O75508 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN11O75508 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN11O75508 KRT17P8-201ENST00000540749 863 ntBASIC15.75■□□□□ 0.11
CLDN11O75508 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN11O75508 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.75■□□□□ 0.11
CLDN11O75508 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CLDN11O75508 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN11O75508 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN11O75508 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN11O75508 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN11O75508 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN11O75508 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
CLDN11O75508 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN11O75508 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN11O75508 AC018665.1-201ENST00000622927 1362 ntBASIC15.75■□□□□ 0.11
CLDN11O75508 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 MSTO2P-201ENST00000314835 1709 ntBASIC15.74■□□□□ 0.11
CLDN11O75508 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN11O75508 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN11O75508 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN11O75508 KLF2P2-201ENST00000416807 1039 ntBASIC15.74■□□□□ 0.11
CLDN11O75508 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN11O75508 GPR53P-205ENST00000457298 1084 ntBASIC15.74■□□□□ 0.11
CLDN11O75508 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN11O75508 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN11O75508 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN11O75508 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.74■□□□□ 0.11
CLDN11O75508 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN11O75508 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN11O75508 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN11O75508 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN11O75508 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN11O75508 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms