Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDUFS3O75489 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFS3O75489 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
NDUFS3O75489 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFS3O75489 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFS3O75489 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NDUFS3O75489 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 BTBD7P1-201ENST00000447253 1453 ntBASIC15.48■□□□□ 0.07
NDUFS3O75489 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.48■□□□□ 0.07
NDUFS3O75489 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NDUFS3O75489 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.48■□□□□ 0.07
NDUFS3O75489 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
NDUFS3O75489 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.48■□□□□ 0.07
NDUFS3O75489 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.48■□□□□ 0.07
NDUFS3O75489 AC092183.1-201ENST00000469884 875 ntBASIC15.48■□□□□ 0.07
NDUFS3O75489 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.48■□□□□ 0.07
NDUFS3O75489 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.48■□□□□ 0.07
NDUFS3O75489 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NDUFS3O75489 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
NDUFS3O75489 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
NDUFS3O75489 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFS3O75489 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NDUFS3O75489 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFS3O75489 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.48■□□□□ 0.07
NDUFS3O75489 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 AL121723.1-201ENST00000445194 1519 ntBASIC15.48■□□□□ 0.07
NDUFS3O75489 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFS3O75489 AC091951.1-201ENST00000512854 2465 ntBASIC15.48■□□□□ 0.07
NDUFS3O75489 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFS3O75489 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFS3O75489 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NDUFS3O75489 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFS3O75489 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFS3O75489 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFS3O75489 AC114501.2-201ENST00000439631 535 ntBASIC15.47■□□□□ 0.07
NDUFS3O75489 AC009477.1-201ENST00000452936 217 ntBASIC15.47■□□□□ 0.07
NDUFS3O75489 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFS3O75489 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFS3O75489 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFS3O75489 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NDUFS3O75489 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFS3O75489 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NDUFS3O75489 MST1L-201ENST00000442552 2185 ntBASIC15.46■□□□□ 0.07
NDUFS3O75489 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFS3O75489 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFS3O75489 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFS3O75489 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFS3O75489 CICP11-201ENST00000434745 2827 ntBASIC15.46■□□□□ 0.07
NDUFS3O75489 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFS3O75489 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFS3O75489 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.46■□□□□ 0.07
NDUFS3O75489 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFS3O75489 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NDUFS3O75489 AC103702.1-201ENST00000548801 2630 ntBASIC15.46■□□□□ 0.07
NDUFS3O75489 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFS3O75489 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NDUFS3O75489 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms