Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TLR4O00206 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TLR4O00206 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TLR4O00206 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.35■□□□□ 0.05
TLR4O00206 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.35■□□□□ 0.05
TLR4O00206 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.35■□□□□ 0.05
TLR4O00206 MIR4313-201ENST00000580760 101 ntBASIC15.35■□□□□ 0.05
TLR4O00206 GNRHR2-203ENST00000581100 1187 ntBASIC15.35■□□□□ 0.05
TLR4O00206 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.35■□□□□ 0.05
TLR4O00206 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.35■□□□□ 0.05
TLR4O00206 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.35■□□□□ 0.05
TLR4O00206 AP005019.2-201ENST00000615104 511 ntBASIC15.35■□□□□ 0.05
TLR4O00206 MIR6787-201ENST00000616675 61 ntBASIC15.35■□□□□ 0.05
TLR4O00206 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TLR4O00206 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TLR4O00206 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TLR4O00206 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TLR4O00206 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.35■□□□□ 0.05
TLR4O00206 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.35■□□□□ 0.05
TLR4O00206 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TLR4O00206 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TLR4O00206 AL596087.1-201ENST00000400979 1969 ntBASIC15.35■□□□□ 0.05
TLR4O00206 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.34■□□□□ 0.05
TLR4O00206 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.34■□□□□ 0.05
TLR4O00206 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.34■□□□□ 0.05
TLR4O00206 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.34■□□□□ 0.05
TLR4O00206 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.34■□□□□ 0.05
TLR4O00206 PFN1P12-201ENST00000455938 534 ntBASIC15.34■□□□□ 0.05
TLR4O00206 KRT18P25-201ENST00000508931 1278 ntBASIC15.34■□□□□ 0.05
TLR4O00206 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TLR4O00206 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.34■□□□□ 0.05
TLR4O00206 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.34■□□□□ 0.05
TLR4O00206 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 AC008687.7-202ENST00000637404 953 ntBASIC15.34■□□□□ 0.05
TLR4O00206 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.34■□□□□ 0.05
TLR4O00206 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.34■□□□□ 0.05
TLR4O00206 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 KRT8P44-201ENST00000441609 1350 ntBASIC15.34■□□□□ 0.05
TLR4O00206 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.34■□□□□ 0.05
TLR4O00206 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TLR4O00206 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TLR4O00206 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TLR4O00206 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.34■□□□□ 0.05
TLR4O00206 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TLR4O00206 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TLR4O00206 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TLR4O00206 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.33■□□□□ 0.05
TLR4O00206 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TLR4O00206 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TLR4O00206 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TLR4O00206 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TLR4O00206 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TLR4O00206 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TLR4O00206 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.33■□□□□ 0.04
TLR4O00206 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.33■□□□□ 0.04
TLR4O00206 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TLR4O00206 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.33■□□□□ 0.04
TLR4O00206 CNN2P8-201ENST00000421872 913 ntBASIC15.33■□□□□ 0.04
TLR4O00206 GAPDHP40-201ENST00000505218 1006 ntBASIC15.33■□□□□ 0.04
TLR4O00206 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TLR4O00206 AC025279.2-201ENST00000569730 653 ntBASIC15.33■□□□□ 0.04
TLR4O00206 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms