Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 AL136301.1-201ENST00000615830 422 ntBASIC17.32■□□□□ 0.36
TRIM17Q9Y577 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM17Q9Y577 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AC022616.1-201ENST00000518688 554 ntBASIC17.31■□□□□ 0.36
TRIM17Q9Y577 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 MIR4783-201ENST00000580343 82 ntBASIC17.31■□□□□ 0.36
TRIM17Q9Y577 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AC138894.2-201ENST00000602838 371 ntBASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AL132994.2-201ENST00000603120 687 ntBASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AP001527.2-201ENST00000614441 631 ntBASIC17.31■□□□□ 0.36
TRIM17Q9Y577 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 AC138466.3-201ENST00000619983 221 ntBASIC17.31■□□□□ 0.36
TRIM17Q9Y577 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRIM17Q9Y577 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 AC138466.4-201ENST00000623965 852 ntBASIC17.3■□□□□ 0.36
TRIM17Q9Y577 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM17Q9Y577 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM17Q9Y577 AC105020.1-201ENST00000435356 2205 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms