Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LINC01115-203ENST00000606068 577 ntBASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.95□□□□□ -0.18
PARPBPQ9NWS1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 SPDYE19P-201ENST00000338590 713 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AL133267.1-201ENST00000398220 340 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AC074338.1-201ENST00000416825 156 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AC002472.2-201ENST00000442739 958 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AC104794.3-201ENST00000566840 1248 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 RRP7BP-205ENST00000566851 833 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 RN7SL204P-201ENST00000582831 262 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AF228730.6-201ENST00000641497 218 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 AC084121.3-201ENST00000641716 218 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PARPBPQ9NWS1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 PIN1P1-201ENST00000412108 996 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms