Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 ECM1P1-201ENST00000604092 1279 ntBASIC18.5■□□□□ 0.55
SALL1Q9NSC2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 AC144831.1-201ENST00000573312 2656 ntBASIC18.5■□□□□ 0.55
SALL1Q9NSC2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 LRRC59-203ENST00000576448 1531 ntBASIC18.5■□□□□ 0.55
SALL1Q9NSC2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.5■□□□□ 0.55
SALL1Q9NSC2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 BRWD1P1-201ENST00000401091 371 ntBASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 RN7SL219P-201ENST00000582872 296 ntBASIC18.49■□□□□ 0.55
SALL1Q9NSC2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 ENPP7P14-201ENST00000621765 1040 ntBASIC18.49■□□□□ 0.55
SALL1Q9NSC2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AC112693.3-201ENST00000624819 1983 ntBASIC18.49■□□□□ 0.55
SALL1Q9NSC2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 C2orf69P2-201ENST00000562032 1123 ntBASIC18.49■□□□□ 0.55
SALL1Q9NSC2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.49■□□□□ 0.55
SALL1Q9NSC2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 MIR1202-201ENST00000408529 83 ntBASIC18.48■□□□□ 0.55
SALL1Q9NSC2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.48■□□□□ 0.55
SALL1Q9NSC2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.48■□□□□ 0.55
SALL1Q9NSC2 HYMAI-201ENST00000635591 3347 ntBASIC18.48■□□□□ 0.55
SALL1Q9NSC2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SALL1Q9NSC2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.47■□□□□ 0.55
SALL1Q9NSC2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SALL1Q9NSC2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms